CDS

Accession Number TCMCG081C22344
gbkey CDS
Protein Id XP_010657494.1
Location complement(join(10056048..10056227,10056364..10056519,10056813..10056932,10057269..10057381,10057717..10057807,10059006..10059153,10059849..10059973,10061178..10061219,10061332..10061649,10061753..10062873,10062962..10063214,10063703..10063884,10063998..10064104,10064418..10064539))
Gene LOC100256290
GeneID 100256290
Organism Vitis vinifera

Protein

Length 1025aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA33471
db_source XM_010659192.2
Definition PREDICTED: ribonuclease E/G-like protein, chloroplastic isoform X2 [Vitis vinifera]

EGGNOG-MAPPER Annotation

COG_category J
Description Ribonuclease E G-like protein, chloroplastic
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004518        [VIEW IN EMBL-EBI]
GO:0004519        [VIEW IN EMBL-EBI]
GO:0004521        [VIEW IN EMBL-EBI]
GO:0004540        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009657        [VIEW IN EMBL-EBI]
GO:0009658        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010239        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0031425        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0090501        [VIEW IN EMBL-EBI]
GO:0090502        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901259        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTTCCGCTTCTCTAGGCGCAACCCTCATGGACTTCCACGAAGCTCCTTCTCACCGCCGCCACCTCCACCTCCTCTCTCCACGCTCTTCCCTTTTCCCCTCCGACCGCTTGCTATTCCCGTACTTTTACCATCACATGCCGCTGGAGAATAATGTGTACAGATTCACTCTTTGTGTAGGCACTCATAATTCAGTCTTAAAGTCATCTATCAAGTCTATGAGGAAAGGCAACTCCAGCACCGCCTTCAAAGGGTTGTGCAAGGTCATTTGGACCATAGAAGCGGATTTGGAAGATGGGCAGCTTCTGTATATAACTGGGGATCCTAATGTCTTGGGTTGCTGGGAACCGGATATGGCTGTTCTAATGTCTCCTACTGAGCACACTAACTTATGGAAGGCTGAAGTCAAGATAACTTGTGGGATAAATTTCAAGTATAATTATTTCCTAAAAGGAGATGCATGGCCATCATGTGATATCATTTGGAAACCTGGCCCTGAATTTTCTCTATTGGTACCTCTTCATGGAAAACAAGATAAAAAAATTATGGTGCGGGATTCATGGATGACATCTAATGCCAGAAGGCCTTCAGCTCATATATGGGGGTCATGGATGGAGGATTCATACTTCCCTGCAGAACATTTGATCTCACCTCCCTCTAGAGATGAAGATGAGATTGCCAAATGCCTTAAAAGTGATTCTCTGTCAAAGCTATTCTTAGATGATCTCTCAGTCGAGGATAAATCTTTCTCTGATAATGAGGATACAATTAGTGCTATGAGTAAAGGCTTAGATTCTAATGGAACAGTCTCTATGAGAGATCAGCCAGTTGAGGAGCCTTGGCTGCTCCAATCATCTCTTATTGCATCCAAGGAAGAGATGGTTTCCAACATGTCTAAAAATATAGATGCTGCACAAGTTGAGGTATCTCACTTAAAATTGCTTGATCAGAGTTACCTACATACAGAAAAGCTGTTGCCTGAAGAAGGGACTAATCTAATTTCTAAGGACGACTCTGTTTCTACTGTTATACTGATTAACTCTTCTATATGTACCATGCAAAGAATTGCTGTATTAGAAGACGGAAGTTTGGTTGAGTTATTGCTGGAACCAGTCAAAAGCAATGTGCAATGTGATAGTGTTTATTTAGGGGTTGTCACAAAACTTGTTCCTCACATGGGTGGTGCATTTGTAAATATCGGGAGTTCTAGACCTTCTCTTATGGACATAAAACGGAGTAGGGAACCATTCATATTCCCTCCATTTCATCATGGAACAAAAGAAAAAGACAATGGTTCTGTATTCAACACACTTAGAGAGAATCCTATAGCCCATGAAAATGAACACACATCATATGATGTCGAAGCTGATGATCTCAGAGAAGTTGACTTTCAGGATGATCCAGTACAATTTGCGCATGATGATTTTGAGGAGCATGAAGTTGAGGATGACTTTGATGTTCTTATTAAGAAAGATCTGAATGGCAGCATTGTCGATCATGGTGGGGTGGAAGTTGATTTTGATGACTACTCAGATGGAATAGAGAACCATATAGATAGTGAAACCATTAACAATTTCCTTCCTGTTGAATTAGAGAAAGGTTTTCATGATTCCCAGCTGCCCCCTCTTCTAGAGATGAAGGATTCTAGACAAGCATATACTGTTGAGAATAAGTGGGCACAGGTTCAGAAAGGCACCAAAATAATTGTACAAGTTGTTAAAGAGGGATTGGGTACAAAAGGTCCCACACTGACAGCTTATCCAAAATTAAGGAGCAGATTCTGGGTACTGCTTACTTGTTGCAACAGAATTGGAGTCTCAAAGAAAATTTCTGGCGTTGAGCGTACAAGATTGAGAGTCATTGCAAAAACTTTGCAGCCCAAGGGTTTTGGTCTGACTGTAAGGACTGTTGCTGCGGGTCATACCTTAGAGGAATTGCAGAAGGACTTGGAAGGCTTGCTCTCAACTTGGAAAAATATAGTGGAACATGCAAAATCTGCAGCTCTTGCAGCAGATGAAGGTGTGGAAGGGGCAATCCCTGTTATTTTGCATAGGGCAATGGGTCAAACTCTCTCCGTTGTCCAGGATTATTTCAATGAGAAGGTTGAGAGCATGGTAGTCGACTCACCAAGGACATATCATGAGGTTACTAACTACCTTCAGGAAATTGCTCCTGATCTTTGTGATCGAGTTGAGTTATACAATAAAAGGGTTCCTCTCTTTGATGAATTCAACATCGAAGAAGAGATCAATAATATTCTAAGTAAAAGGGTCCCACTCCCTAATGGAGGTTCTTTAGTGATTGAACAAACTGAGGCATTAGTCTCTATTGATGTGAATGGTGGGCACGGGATGCTTGGCAATGGCACTTCGCAAGAAAAAGCTATTCTTGATGTCAACCTTGCTGCAGCAAAACAAATTGCAAGGGAGTTACGACTGAGAGATATTGGCGGCATCATCGTAGTAGATTTCATTGATATGTTGGATGACTGTGAGTTCGACTCTGTTTCAAATAAGAGATTGGTGTATGAAGAAGTTAAGAAAGCTGTTGAGAGAGACCGGTCAATGGTGAAAGTTTCTGAATTGTCTAGGCATGGGCTTATGGAAATAACCAGAAAGAGGGTTCGACCTAGTGTGACGTTTATGATTAGCGAACCTTGCAGTTGCTGTCACGGTACTGGGAGAGTTGAAGCTTTGGAAACCTCCTTCTCAAAAATTGAACAAGAAATTTGCCGGTTGCTTGCAATGACAGAGGAGAAAGCTGACCCTGAAAATCCTAATTCCTGGCCAAGATTCATCCTGATGGTTGACCGCTTCATGTGTAACTACTTGACTTCAGGGAAAAGGACAAGACTGGCAATCTTGAGTAGTTCTCTCAAAGTCTGGATTCTTCTAAAGGTTGCCAGAGGTTTCACTAGGGGTGCGTTTGAGGTGAAACCTTTTACAGATGATAAAGTGAACATTAGTTCACATCAAGGTCCCATTTCGATGTTGCGACCAACAGAGGCTGGAACCTACAATCCCAGAAGGAATGTAACCCTCTTTCCAATCAAAAAATGGAAGACTGGTGGGAAATGA
Protein:  
MASASLGATLMDFHEAPSHRRHLHLLSPRSSLFPSDRLLFPYFYHHMPLENNVYRFTLCVGTHNSVLKSSIKSMRKGNSSTAFKGLCKVIWTIEADLEDGQLLYITGDPNVLGCWEPDMAVLMSPTEHTNLWKAEVKITCGINFKYNYFLKGDAWPSCDIIWKPGPEFSLLVPLHGKQDKKIMVRDSWMTSNARRPSAHIWGSWMEDSYFPAEHLISPPSRDEDEIAKCLKSDSLSKLFLDDLSVEDKSFSDNEDTISAMSKGLDSNGTVSMRDQPVEEPWLLQSSLIASKEEMVSNMSKNIDAAQVEVSHLKLLDQSYLHTEKLLPEEGTNLISKDDSVSTVILINSSICTMQRIAVLEDGSLVELLLEPVKSNVQCDSVYLGVVTKLVPHMGGAFVNIGSSRPSLMDIKRSREPFIFPPFHHGTKEKDNGSVFNTLRENPIAHENEHTSYDVEADDLREVDFQDDPVQFAHDDFEEHEVEDDFDVLIKKDLNGSIVDHGGVEVDFDDYSDGIENHIDSETINNFLPVELEKGFHDSQLPPLLEMKDSRQAYTVENKWAQVQKGTKIIVQVVKEGLGTKGPTLTAYPKLRSRFWVLLTCCNRIGVSKKISGVERTRLRVIAKTLQPKGFGLTVRTVAAGHTLEELQKDLEGLLSTWKNIVEHAKSAALAADEGVEGAIPVILHRAMGQTLSVVQDYFNEKVESMVVDSPRTYHEVTNYLQEIAPDLCDRVELYNKRVPLFDEFNIEEEINNILSKRVPLPNGGSLVIEQTEALVSIDVNGGHGMLGNGTSQEKAILDVNLAAAKQIARELRLRDIGGIIVVDFIDMLDDCEFDSVSNKRLVYEEVKKAVERDRSMVKVSELSRHGLMEITRKRVRPSVTFMISEPCSCCHGTGRVEALETSFSKIEQEICRLLAMTEEKADPENPNSWPRFILMVDRFMCNYLTSGKRTRLAILSSSLKVWILLKVARGFTRGAFEVKPFTDDKVNISSHQGPISMLRPTEAGTYNPRRNVTLFPIKKWKTGGK